pLenti-III-UBC

                            LOCUS       dna                      8318 bp                                   
FEATURES             Location/Qualifiers
     Other Gene      109..289
                     /gene="HIV-1_5_LTR other"
     Other Gene      400..444
                     /gene="HIV-1_psi_pack other"
     misc_binding    486..491
                     /dbxref="REBASE:NruI"
     Regulatory_Seq  951..1184
                     /gene="RRE reg"
     ORF             994..1695
                     /sequence="ORF_1 rf(1)"
     Promoter        1827..3038
                     /gene="hUbC prom"
     misc_binding    3067..3072
                     /dbxref="REBASE:KpnI"
     misc_binding    3094..3099
                     /dbxref="REBASE:EcoRI"
     misc_binding    3118..3123
                     /dbxref="REBASE:HincII"
     misc_binding    3124..3129
                     /dbxref="REBASE:EcoRV"
     misc_binding    3130..3135
                     /dbxref="REBASE:ApaI"
     misc_binding    3136..3143
                     /dbxref="REBASE:NotI"
     misc_binding    3145..3150
                     /dbxref="REBASE:BamHI"
     misc_binding    3151..3156
                     /dbxref="REBASE:XbaI"
     misc_binding    3163..3168
                     /dbxref="REBASE:XhoI"
     Promoter        3213..3481
                     /gene="SV40 prom"
     Rep_Origin      3380..3457
                     /gene="SV40 origin"
     ORF             3447..4115
                     /sequence="ORF_2 rf(3)"
     misc_binding    3460..3472
                     /dbxref="REBASE:SfiI"
     Marker          3516..4115
                     /gene="puro marker"
     Other Gene      4725..4777
                     /gene="delta_U3 other"
     Other Gene      4778..4958
                     /gene="HIV-1_5_LTR other"
     Rep_Origin      5465..6084
                     /gene="pBR322 origin"
     Promoter        6342..6391
                     /gene="NEOKAN prom"
     misc_binding    6449..6454
                     /dbxref="REBASE:BclI"
     ORF             6480..7274
                     /sequence="ORF_3 rf(3)"
     Marker          6483..7271
                     /gene="NTP_II marker"
     Rep_Origin      7379..7685
                     /gene="f1 origin"
     Other Gene      7740..7841
                     /gene="RITR other"
     Other Gene      7740..7841
                     /gene="LITR other"
     Other Gene      7921..8069
                     /gene="Encap other"
BASE COUNT    1980 a   2027 c   2394 g   1917 t    0 others
ORIGIN
        1 cgtgccttat taggaaggca acagacgggt ctgacatgga ttggacgaac cactgaattg     
       61 ccgcattgca gagatattgt atttaagtgc ctagctcgat acataaacgg gtctctctgg     
      121 ttagaccaga tctgagcctg ggagctctct ggctaactag ggaacccact gcttaagcct     
      181 caataaagct tgccttgagt gcttcaagta gtgtgtgccc gtctgttgtg tgactctggt     
      241 aactagagat ccctcagacc cttttagtca gtgtggaaaa tctctagcag tggcgcccga     
      301 acagggactt gaaagcgaaa gggaaaccag aggagctctc tcgacgcagg actcggcttg     
      361 ctgaagcgcg cacggcaaga ggcgaggggc ggcgactggt gagtacgcca aaaattttga     
      421 ctagcggagg ctagaaggag agagatgggt gcgagagcgt cagtattaag cgggggagaa     
      481 ttagatcgcg atgggaaaaa attcggttaa ggccaggggg aaagaaaaaa tataaattaa     
      541 aacatatagt atgggcaagc agggagctag aacgattcgc agttaatcct ggcctgttag     
      601 aaacatcaga aggctgtaga caaatactgg gacagctaca accatccctt cagacaggat     
      661 cagaagaact tagatcatta tataatacag tagcaaccct ctattgtgtg catcaaagga     
      721 tagagataaa agacaccaag gaagctttag acaagataga ggaagagcaa aacaaaagta     
      781 agaccaccgc acagcaagcc cgctgatctt cagacctgga ggaggagata tgagggacat     
      841 tggagaagtg aattatataa atataaagta gtaaaaattg aaccattagg agtagcaccc     
      901 accaaggcaa agagaagagt ggtgcagaga gaaaaaagag cagtgggaat aggagctttg     
      961 ttccttgggt tcttgggagc agcaggaagc actatgggcg cagcgtcaat gacgctgacg     
     1021 gtacaggcca gacaattatt gtctggtata gtgcagcagc agaacaattt gctgagggct     
     1081 attgaggcgc aacagcatct gttgcaactc acagtctggg gcatcaagca gctccaggca     
     1141 agaatcctgg ctgtggaaag atacctaaag gatcaacagc tcctggggat ttggggttgc     
     1201 tctggaaaac tcatttgcac cactgctgtg ccttggaatg ctagttggag taataaatct     
     1261 ctggaacaga tttggaatca cacgacctgg atggagtggg acagagaaat taacaattac     
     1321 acaagcttaa tacactcctt aattgaagaa tcgcaaaacc agcaagaaaa gaatgaacaa     
     1381 gaattattgg aattagataa atgggcaagt ttgtggaatt ggtttaacat aacaaattgg     
     1441 ctgtggtata taaaattatt cataatgata gtaggaggct tggtaggttt aagaatagtt     
     1501 tttgctgtac tttctatagt gaatagagtt aggcagggat attcaccatt atcgtttcag     
     1561 acccacctcc caaccccgag gggacccgac aggcccgaag gaatagaaga agaaggtgga     
     1621 gagagagaca gagacagatc cattcgatta gtgaacggat ctcgacggta tcgaaagctt     
     1681 gggattcgaa tttaaaagaa aaggggggat tggggggtac agtgcagggg aaagaatagt     
     1741 agacataata gcaacagaca tacaaactaa agaactacaa aaacaaatta caaaaattca     
     1801 aaattttcgg gtttttcgaa cctagaggcc tccgcgccgg gttttggcgc ctcccgcggg     
     1861 cgcccccctc ctcacggcga gcgctgccac gtcagacgaa gggcgcagcg agcgtcctga     
     1921 tccttccgcc cggacgctca ggacagcggc ccgctgctca taagactcgg ccttagaacc     
     1981 ccagtatcag cagaaggaca ttttaggacg ggacttgggt gactctaggg cactggtttt     
     2041 ctttccagag agcggaacag gcgaggaaaa gtagtccctt ctcggcgatt ctgcggaggg     
     2101 atctccgtgg ggcggtgaac gccgatgatt atataaggac gcgccgggtg tggcacagct     
     2161 agttccgtcg cagccgggat ttgggtcgcg gttcttgttt gtggatcgct gtgatcgtca     
     2221 cttggtgagt agcgggctgc tgggctggcc ggggctttcg tggccgccgg gccgctcggt     
     2281 gggacggaag cgtgtggaga gaccgccaag ggctgtagtc tgggtccgcg agcaaggttg     
     2341 ccctgaactg ggggttgggg ggagcgcagc aaaatggcgg ctgttcccga gtcttgaatg     
     2401 gaagacgctt gtgaggcggg ctgtgaggtc gttgaaacaa ggtggggggc atggtgggcg     
     2461 gcaagaaccc aaggtcttga ggccttcgct aatgcgggaa agctcttatt cgggtgagat     
     2521 gggctggggc accatctggg gaccctgacg tgaagtttgt cactgactgg agaactcggt     
     2581 ttgtcgtctg ttgcgggggc ggcagttatg gcggtgccgt tgggcagtgc acccgtacct     
     2641 ttgggagcgc gcgccctcgt cgtgtcgtga cgtcacccgt tctgttggct tataatgcag     
     2701 ggtggggcca cctgccggta ggtgtgcggt aggcttttct ccgtcgcagg acgcagggtt     
     2761 cgggcctagg gtaggctctc ctgaatcgac aggcgccgga cctctggtga ggggagggat     
     2821 aagtgaggcg tcagtttctt tggtcggttt tatgtaccta tcttcttaag tagctgaagc     
     2881 tccggttttg aactatgcgc tcggggttgg cgagtgtgtt ttgtgaagtt ttttaggcac     
     2941 cttttgaaat gtaatcattt gggtcaatat gtaattttca gtgttagact agtaaattgt     
     3001 ccgctaaatt ctggccgttt ttggcttttt tgttagacgc tagcggatca attgagtact     
     3061 tacgtaggta ccccagtgtg gtggcctgca ggtgaattca ctagtaccgg taggcctgtc     
     3121 gacgatatcg ggcccgcggc cgctggatcc tctagactgc agctcgagta cccatacgac     
     3181 gtcccagact acgcttgagt ttaaacacgc gtggtgtgga aagtccccag gctccccagc     
     3241 aggcagaagt atgcaaagca tgcatctcaa ttagtcagca accaggtgtg gaaagtcccc     
     3301 aggctcccca gcaggcagaa gtatgcaaag catgcatctc aattagtcag caaccatagt     
     3361 cccgccccta actccgccca tcccgcccct aactccgccc agttccgccc attctccgcc     
     3421 ccatggctga ctaatttttt ttatttatgc agaggccgag gccgcctcgg cctctgagct     
     3481 attccagaag tagtgaggag gcttttttgg aggccatgac cgagtacaag cccacggtgc     
     3541 gcctcgccac ccgcgacgac gtccctcggg ccgtacgcac cctcgccgcc gcgttcgccg     
     3601 actaccccgc cacgcgccac accgtggacc cggaccgcca catcgagcgg gtcaccgagc     
     3661 tgcaagaact cttcctcacg cgcgtcgggc tcgacatcgg caaggtgtgg gtcgcggacg     
     3721 acggcgccgc ggtggcggtc tggaccacgc cggagagcgt cgaagcgggg gcggtgttcg     
     3781 ccgagatcgg cccgcgcatg gccgagttga gcggttcccg gctggccgcg cagcaacaga     
     3841 tggaagggct cctggcgccg caccggccca aggagcccgc gtggttcctg gccaccgtcg     
     3901 gcgtctcgcc cgaccaccag ggcaagggtc tgggcagcgc cgtcgtgctc cccggagtgg     
     3961 aggcggccga gcgcgccggg gtgcccgcct tcctggagac ctccgcgccc cgcaacctcc     
     4021 ccttctacga gcggctcggc ttcaccgtca ccgccgacgt cgaggtgccc gaaggaccgc     
     4081 gcacctggtg catgacccgc aagcccggtg cctgaacgcg ttccggaaat caacctctgg     
     4141 attacaaaat ttgtgaaaga ttgactggta ttcttaacta tgttgctcct tttacgctat     
     4201 gtggatacgc tgctttaatg cctttgtatc atgctattgc ttcccgtatg gctttcattt     
     4261 tctcctcctt gtataaatcc tggttgctgt ctctttatga ggagttgtgg cccgttgtca     
     4321 ggcaacgtgg cgtggtgtgc actgtgtttg ctgacgcaac ccccactggt tggggcattg     
     4381 ccaccacctg tcagctcctt tccgggactt tcgctttccc cctccctatt gccacggcgg     
     4441 aactcatcgc cgcctgcctt gcccgctgct ggacaggggc tcggctgttg ggcactgaca     
     4501 attccgtggt gttgtcgggg aagctgacgt cctttccatg gctgctcgcc tgtgttgcca     
     4561 cctggattct gcgcgggacg tccttctgct acgtcccttc ggccctcaat ccagcggacc     
     4621 ttccttcccg cggcctgctg ccggctctgc ggcctcttcc gcgtctcgcc ttcgccctca     
     4681 gacgagtcgg atctcccttt gggccgcctc cccgcctgtc cggatggaag ggctaattca     
     4741 ctcccaacga atacaagatc tgctttttgc ttgtactggg tctctctggt tagaccagat     
     4801 ctgagcctgg gagctctctg gctaactagg gaacccactg cttaagcctc aataaagctt     
     4861 gccttgagtg cttcaagtag tgtgtgcccg tctgttgtgt gactctggta actagagatc     
     4921 cctcagaccc ttttagtcag tgtggaaaat ctctagcagt agtagttcat gtcatcttat     
     4981 tattcagtat ttataacttg caaagaaatg aatatcagag agtgagagga acttgtttat     
     5041 tgcagcttat aatggttaca aataaagcaa tagcatcaca aatttcacaa ataaagcatt     
     5101 tttttcactg cattctagtt gtggtttgtc caaactcatc aatgtatctt atcatgtctg     
     5161 gcatctatgt cgggtgcgga gaaagaggta atgaaatggc attatgggta ttatgggtct     
     5221 gcattaatga atcggccaac ggatgtcggt gtgaaatacc gcacagatgc gtaaggagaa     
     5281 aataccgcat caggcgctct tccgcttcct cgctcactga ctcgctgcgc tcggtcgttc     
     5341 ggctgcggcg agcggtatca gctcactcaa aggcggtaat acggttatcc acagaatcag     
     5401 gggataacgc aggaaagaac atgtgagcaa aaggccagca aaaggccagg aaccgtaaaa     
     5461 aggccgcgtt gctggcgttt ttccataggc tccgcccccc tgacgagcat cacaaaaatc     
     5521 gacgctcaag tcagaggtgg cgaaacccga caggactata aagataccag gcgtttcccc     
     5581 ctggaagctc cctcgtgcgc tctcctgttc cgaccctgcc gcttaccgga tacctgtccg     
     5641 cctttctccc ttcgggaagc gtggcgcttt ctcatagctc acgctgtagg tatctcagtt     
     5701 cggtgtaggt cgttcgctcc aagctgggct gtgtgcacga accccccgtt cagcccgacc     
     5761 gctgcgcctt atccggtaac tatcgtcttg agtccaaccc ggtaagacac gacttatcgc     
     5821 cactggcagc agccactggt aacaggatta gcagagcgag gtatgtaggc ggtgctacag     
     5881 agttcttgaa gtggtggcct aactacggct acactagaag gacagtattt ggtatctgcg     
     5941 ctctgctgaa gccagttacc ttcggaaaaa gagttggtag ctcttgatcc ggcaaacaaa     
     6001 ccaccgctgg tagcggtggt ttttttgttt gcaagcagca gattacgcgc agaaaaaaag     
     6061 gatctcaaga agatcctttg atcttttcta cggggtctga cgctcagtgg aacgaaaact     
     6121 cacgttaagg gattttggcc atgagattat caaaaaggat cttcacctag atccttttca     
     6181 cgtagaaagc cagtccgcag aaacggtgct gaccccggat gaatgtcagc tactgggcta     
     6241 tctggacaag ggaaaacgca agcgcaaaga gaaagcaggt agcttgcagt gggcttacat     
     6301 ggcgatagct agactgggcg gttttatgga cagcaagcga accggaattg ccagctgggg     
     6361 cgccctctgg taaggttggg aagccctgca aagtaaactg gatggctttc ttgccgccaa     
     6421 ggatctgatg gcgcagggga tcaagctctg atcaagagac aggatgagga tcgtttcgca     
     6481 tgattgaaca agatggattg cacgcaggtt ctccggccgc ttgggtggag aggctattcg     
     6541 gctatgactg ggcacaacag acaatcggct gctctgatgc cgccgtgttc cggctgtcag     
     6601 cgcaggggcg cccggttctt tttgtcaaga ccgacctgtc cggtgccctg aatgaactgc     
     6661 aagacgaggc agcgcggcta tcgtggctgg ccacgacggg cgttccttgc gcagctgtgc     
     6721 tcgacgttgt cactgaagcg ggaagggact ggctgctatt gggcgaagtg ccggggcagg     
     6781 atctcctgtc atctcacctt gctcctgccg agaaagtatc catcatggct gatgcaatgc     
     6841 ggcggctgca tacgcttgat ccggctacct gcccattcga ccaccaagcg aaacatcgca     
     6901 tcgagcgagc acgtactcgg atggaagccg gtcttgtcga tcaggatgat ctggacgaag     
     6961 agcatcaggg gctcgcgcca gccgaactgt tcgccaggct caaggcgagc atgcccgacg     
     7021 gcgaggatct cgtcgtgacc catggcgatg cctgcttgcc gaatatcatg gtggaaaatg     
     7081 gccgcttttc tggattcatc gactgtggcc ggctgggtgt ggcggaccgc tatcaggaca     
     7141 tagcgttggc tacccgtgat attgctgaag agcttggcgg cgaatgggct gaccgcttcc     
     7201 tcgtgcttta cggtatcgcc gctcccgatt cgcagcgcat cgccttctat cgccttcttg     
     7261 acgagttctt ctgaattttg ttaaaatttt tgttaaatca gctcattttt taaccaatag     
     7321 gccgaaatcg gcaaaatccc ttataaatca aaagaataga ccgagatagg gttgagtgtt     
     7381 gttccagttt ggaacaagag tccactatta aagaacgtgg actccaacgt caaagggcga     
     7441 aaaaccgtct atcagggcga tggcccacta cgtgaaccat caccctaatc aagttttttg     
     7501 gggtcgaggt gccgtaaagc actaaatcgg aaccctaaag ggagcccccg atttagagct     
     7561 tgacggggaa agccggcgaa cgtggcgaga aaggaaggga agaaagcgaa aggagcgggc     
     7621 gctagggcgc tggcaagtgt agcggtcacg ctgcgcgtaa ccaccacacc cgccgcgctt     
     7681 aatgcgccgc tacagggcgc gtccattcgc cattcaggat cgaattaatt cttaattaac     
     7741 atcatcaata atataccttt tttggattga agccaatatg ataatgaggg ggtggagttt     
     7801 gtgacgtggc gcggggcgtg ggaacggggc gggtgacgta gtagtgtggc ggaagtgtga     
     7861 tgttgcaagt gtggcggaac acatgtaagc gacggatgtg gcaaaagtga cgtttttggt     
     7921 gtgcgccggt gtacacagga agtgacaatt ttcgcgcggt tttaggcgga tgttgtagta     
     7981 aatttgggcg taaccgagta agatttggcc attttcgcgg gaaaactgaa taagaggaag     
     8041 tgaaatctga ataattttgt gttactcata gcgcgtaata ctctcatgag cggatacata     
     8101 tttgaatgta tttagaaaaa taaacaaata ggggttccgc gcacatttcc ccgaaaagtg     
     8161 ccacctgacg taactataac ggtcctaagg tagcgaaaat gtagtcttat gcaatactct     
     8221 tgtagtcttg caacatggta acgatgagtt agcaacatgc cttacaagga gagaaaaagc     
     8281 accgtgcatg ccgattggtg gaagtaaggt ggtacgat                             
//