pLenti-U6-sgRNA-EF1a-FnCas12a-2A-GFP
Vector Name | pLenti-U6-sgRNA-EF1a-FnCas12a-2A-GFP |
VectorType | Lentivector |
Antibiotic Information | Bacterial: Kanamycin |
Sequencing Primers | U6 Forward Primer: 5'--GAGGGCCTATTTCCCATGATTCC--3' |
Additional Information | No Additional Information |
Double-click on the features for more information
***Note: The vector sequence shown below is representative of the parental vector
only and does not include the gene of interest. The sequence of the gene can be found
through the accession number link on the product page. The restriction sites within the
cloning region may differ from the provided sequence.
1 ttttggattg aagccaatat gataatgagg gggtggagtt tgtgacgtgg cgcggggcgt 61 gggaacgggg cgggtgacgt agtagtgtgg cggaagtgtg atgttgcaag tgtggcggaa 121 cacatgtaag cgacggatgt ggcaaaagtg acgtttttgg tgtgcgccgg tgtacacagg 181 aagtgacaat tttcgcgcgg ttttaggcgg atgttgtagt aaatttgggc gtaaccgagt 241 aagatttggc cattttcgcg ggaaaactga ataagaggaa gtgaaatctg aataattttg 301 tgttactcat agcgcgtaat acggcagacc tcagcgctag attattgaag catttatcag 361 ggttattgtc tcatgagcgg atacatattt gaatgtattt agaaaaataa acaaataggg 421 gttccgcgca catttccccg aaaagtgcca cctgacgtta actataacgg tcctaaggta 481 gcgaaaatgt agtcttatgc aatactcttg tagtcttgca acatggtaac gatgagttag 541 caacatgcct tacaaggaga gaaaaagcac cgtgcatgcc gattggtgga agtaaggtgg 601 tacgatcgtg ccttattagg aaggcaacag acgggtctga catggattgg acgaaccact 661 gaattgccgc attgcagaga tattgtattt aagtgcctag ctcgatacat aaacgggtct 721 ctctggttag accagatctg agcctgggag ctctctggct aactagggaa cccactgctt 781 aagcctcaat aaagcttgcc ttgagtgctt caagtagtgt gtgcccgtct gttgtgtgac 841 tctggtaact agagatccct cagacccttt tagtcagtgt ggaaaatctc tagcagtggc 901 gcccgaacag ggacttgaaa gcgaaaggga aaccagagga gctctctcga cgcaggactc 961 ggcttgctga agcgcgcacg gcaagaggcg aggggcggcg actggtgagt acgccaaaaa 1021 ttttgactag cggaggctag aaggagagag atgggtgcga gagcgtcagt attaagcggg 1081 ggagaattag atcgcgatgg gaaaaaattc ggttaaggcc agggggaaag aaaaaatata 1141 aattaaaaca tatagtatgg gcaagcaggg agctagaacg attcgcagtt aatcctggcc 1201 tgttagaaac atcagaaggc tgtagacaaa tactgggaca gctacaacca tcccttcaga 1261 caggatcaga agaacttaga tcattatata atacagtagc aaccctctat tgtgtgcatc 1321 aaaggataga gataaaagac accaaggaag ctttagacaa gatagaggaa gagcaaaaca 1381 aaagtaagac caccgcacag caagcccgct gatcttcaga cctggaggag gagatatgag 1441 ggacattgga gaagtgaatt atataaatat aaagtagtaa aaattgaacc attaggagta 1501 gcacccacca aggcaaagag aagagtggtg cagagagaaa aaagagcagt gggaatagga 1561 gctttgttcc ttgggttctt gggagcagca ggaagcacta tgggcgcagc gtcaatgacg 1621 ctgacggtac aggccagaca attattgtct ggtatagtgc agcagcagaa caatttgctg 1681 agggctattg aggcgcaaca gcatctgttg caactcacag tctggggcat caagcagctc 1741 caggcaagaa tcctggctgt ggaaagatac ctaaaggatc aacagctcct ggggatttgg 1801 ggttgctctg gaaaactcat ttgcaccact gctgtgcctt ggaatgctag ttggagtaat 1861 aaatctctgg aacagatttg gaatcacacg acctggatgg agtgggacag agaaattaac 1921 aattacacaa gcttaataca ctccttaatt gaagaatcgc aaaaccagca agaaaagaat 1981 gaacaagaat tattggaatt agataaatgg gcaagtttgt ggaattggtt taacataaca 2041 aattggctgt ggtatataaa attattcata atgatagtag gaggcttggt aggtttaaga 2101 atagtttttg ctgtactttc tatagtgaat agagttaggc agggatattc accattatcg 2161 tttcagaccc acctcccaac cccgagggga cccgacaggc ccgaaggaat agaagaagaa 2221 ggtggagaga gagacagaga cagatccatt cgattagtga acggatctcg acggtatcga 2281 aagcttggga ttcgaattta aaagaaaagg ggggattggg gggtacagtg caggggaaag 2341 aatagtagac ataatagcaa cagacataca aactaaagaa ctacaaaaac aaattacaaa 2401 aattcaaaat tttcgggttt ttcgaaccta gggagggcct atttcccatg attccttcat 2461 atttgcatat acgatacaag gctgttagag agataattgg aattaatttg actgtaaaca 2521 caaagatatt agtacaaaat acgtgacgta gaaagtaata atttcttggg tagtttgcag 2581 ttttaaaatt atgttttaaa atggactatc atatgcttac cgtaacttga aagtatttcg 2641 atttcttggc tttatatatc ttgtggaaag gacgaaacac cgtctaagaa ctttaaataa 2701 tttctactgt tgtagatttg tcttcctcga ggaagacaat ttttttagtc agtctagaga 2761 gtgggaattg gctccggtgc ccgtcagtgg gcagagcgca catcgcccac agtccccgag 2821 aagttggggg gaggggtcgg caattgaacc ggtgcctaga gaaggtggcg cggggtaaac 2881 tgggaaagtg atgtcgtgta ctggctccgc ctttttcccg agggtggggg agaaccgtat 2941 ataagtgcag tagtcgccgt gaacgttctt tttcgcaacg ggtttgccgc cagaacacag 3001 gtaagtgccg tgtgtggttc ccgcgggcct ggcctcttta cgggttatgg cccttgcgtg 3061 ccttgaatta cttccactgg ctgcagtacg tgattcttga tcccgagctt cgggttggaa 3121 gtgggtggga gagttcgagg ccttgcgctt aaggagcccc ttcgcctcgt gcttgagttg 3181 aggcctggcc tgggcgctgg ggccgccgcg tgcgaatctg gtggcacctt cgcgcctgtc 3241 tcgctgcttt cgataagtct ctagccattt aaaatttttg atgacctgct gcgacgcttt 3301 ttttctggca agatagtctt gtaaatgcgg gccaagatct gcacactggt atttcggttt 3361 ttggggccgc gggcggcgac ggggcccgtg cgtcccagcg cacatgttcg gcgaggcggg 3421 gcctgcgagc gcggccaccg agaatcggac gggggtagtc tcaagctggc cggcctgctc 3481 tggtgcctgg cctcgcgccg ccgtgtatcg ccccgccctg ggcggcaagg ctggcccggt 3541 cggcaccagt tgcgtgagcg gaaagatggc cgcttcccgg ccctgctgca gggagctcaa 3601 aatggaggac gcggcgctcg ggagagcggg cgggtgagtc acccacacaa aggaaaaggg 3661 cctttccgtc ctcagccgtc gcttcatgtg actccacgga gtaccgggcg ccgtccaggc 3721 acctcgatta gttctcgagc ttttggagta cgtcgtcttt aggttggggg gaggggtttt 3781 atgcgatgga gtttccccac actgagtggg tggagactga agttaggcca gcttggcact 3841 tgatgtaatt ctccttggaa tttgcccttt ttgagtttgg atcttggttc attctcaagc 3901 ctcagacagt ggttcaaagt ttttttcttc catttcaggt gtcgtgagga atttcgactg 3961 ctagcatgag catctaccag gagttcgtca acaagtattc actgagtaag acactgcggt 4021 tcgagctgat cccacagggc aagacactgg agaacatcaa ggcccgaggc ctgattctgg 4081 acgatgagaa gcgggcaaaa gactataaga aagccaagca gatcattgat aaataccacc 4141 agttctttat cgaggaaatt ctgagctccg tgtgcatcag tgaggatctg ctgcagaatt 4201 actcagacgt gtacttcaag ctgaagaaga gcgacgatga caacctgcag aaggacttca 4261 agtccgccaa ggacaccatc aagaaacaga ttagcgagta catcaaggac tccgaaaagt 4321 ttaaaaatct gttcaaccag aatctgatcg atgctaagaa aggccaggag tccgacctga 4381 tcctgtggct gaaacagtct aaggacaatg ggattgaact gttcaaggct aactccgata 4441 tcactgatat tgacgaggca ctggaaatca tcaagagctt caagggatgg accacatact 4501 ttaaaggctt ccacgagaac cgcaagaacg tgtactccag caacgacatt cctacctcca 4561 tcatctaccg aatcgtcgat gacaatctgc caaagttcct ggagaacaag gccaaatatg 4621 aatctctgaa ggacaaagct cccgaggcaa ttaattacga acagatcaag aaagatctgg 4681 ctgaggaact gacattcgat atcgactata agactagcga ggtgaaccag agggtctttt 4741 ccctggacga ggtgtttgaa atcgccaatt tcaacaatta cctgaaccag tccggcatta 4801 ctaaattcaa taccatcatt ggcgggaagt ttgtgaacgg ggagaatacc aagcgcaagg 4861 gaattaacga atacatcaat ctgtatagcc agcagatcaa cgacaaaact ctgaagaaat 4921 acaagatgtc tgtgctgttc aaacagatcc tgagtgatac cgagtccaag tcttttgtca 4981 ttgataaact ggaagatgac tcagacgtgg tcactaccat gcagagcttt tatgagcaga 5041 tcgccgcttt caagacagtg gaggaaaaat ctattaagga aactctgagt ctgctgttcg 5101 atgacctgaa agcccagaag ctggacctga gtaagatcta cttcaaaaac gataagagtc 5161 tgacagacct gtcacagcag gtgtttgatg actattccgt gattgggacc gccgtcctgg 5221 agtacattac acagcagatc gctccaaaga acctggataa tccctctaag aaagagcagg 5281 aactgatcgc taagaaaacc gagaaggcaa aatatctgag tctggaaaca attaagctgg 5341 cactggagga gttcaacaag cacagggata ttgacaaaca gtgccgcttt gaggaaatcc 5401 tggccaactt cgcagccatc cccatgattt ttgatgagat cgcccagaac aaagacaatc 5461 tggctcagat cagtattaag taccagaacc agggcaagaa agacctgctg caggcttcag 5521 cagaagatga cgtgaaagcc atcaaggatc tgctggacca gaccaacaat ctgctgcaca 5581 agctgaaaat cttccatatt agtcagtcag aggataaggc taatatcctg gataaagacg 5641 aacacttcta cctggtgttc gaggaatgtt acttcgagct ggcaaacatt gtccccctgt 5701 ataacaagat taggaactac atcacacaga agccttactc tgacgagaag tttaaactga 5761 acttcgaaaa tagtaccctg gccaacgggt gggataagaa caaggagcct gacaacacag 5821 ctatcctgtt catcaaggat gacaagtact atctgggagt gatgaataag aaaaacaata 5881 agatcttcga tgacaaagcc attaaggaga acaaagggga aggatacaag aaaatcgtgt 5941 ataagctgct gcccggcgca aataagatgc tgcctaaggt gttcttcagc gccaagagta 6001 tcaaattcta caacccatcc gaggacatcc tgcggattag aaatcactca acacatacta 6061 agaacgggag cccccagaag ggatatgaga aatttgagtt caacatcgag gattgcagga 6121 agtttattga cttctacaag cagagcatct ccaaacaccc tgaatggaag gattttggct 6181 tccggttttc cgacacacag agatataact ctatcgacga gttctaccgc gaggtggaaa 6241 atcaggggta taagctgact tttgagaaca tttctgaaag ttacatcgac agcgtggtca 6301 atcagggaaa gctgtacctg ttccagatct ataacaaaga tttttcagca tacagcaagg 6361 gcagaccaaa cctgcataca ctgtactgga aggccctgtt cgatgagagg aatctgcagg 6421 acgtggtcta taaactgaac ggagaggccg aactgtttta ccggaagcag tctattccta 6481 agaaaatcac tcacccagct aaggaggcca tcgctaacaa gaacaaggac aatcctaaga 6541 aagagagcgt gttcgaatac gatctgatta aggacaagcg gttcaccgaa gataagttct 6601 ttttccattg tccaatcacc attaacttca agtcaagcgg cgctaacaag ttcaacgacg 6661 agatcaatct gctgctgaag gaaaaagcaa acgatgtgca catcctgagc attgaccgag 6721 gagagcggca tctggcctac tataccctgg tggatggcaa agggaatatc attaagcagg 6781 atacattcaa catcattggc aatgaccgga tgaaaaccaa ctaccacgat aaactggctg 6841 caatcgagaa ggatagagac tcagctagga aggactggaa gaaaatcaac aacattaagg 6901 agatgaagga aggctatctg agccaggtgg tccatgagat tgcaaagctg gtcatcgaat 6961 acaatgccat tgtggtgttc gaggatctga acttcggctt taagaggggg cgctttaagg 7021 tggaaaaaca ggtctatcag aagctggaga aaatgctgat cgaaaagctg aattacctgg 7081 tgtttaaaga taacgagttc gacaagaccg gaggcgtcct gagagcctac cagctgacag 7141 ctccctttga aactttcaag aaaatgggaa aacagacagg catcatctac tatgtgccag 7201 ccggattcac ttccaagatc tgccccgtga ccggctttgt caaccagctg taccctaaat 7261 atgagtcagt gagcaagtcc caggaatttt tcagcaagtt cgataagatc tgttataatc 7321 tggacaaggg gtacttcgag ttttccttcg attacaagaa cttcggcgac aaggccgcta 7381 aggggaaatg gaccattgcc tccttcggat ctcgcctgat caactttcga aattccgata 7441 aaaaccacaa ttgggacact agggaggtgt acccaaccaa ggagctggaa aagctgctga 7501 aagactactc tatcgagtat ggacatggcg aatgcatcaa ggcagccatc tgtggcgaga 7561 gtgataagaa atttttcgcc aagctgacct cagtgctgaa tacaatcctg cagatgcgga 7621 actcaaagac cgggacagaa ctggactatc tgattagccc cgtggctgat gtcaacggaa 7681 acttcttcga cagcagacag gcacccaaaa atatgcctca ggatgcagac gccaacgggg 7741 cctaccacat cgggctgaag ggactgatgc tgctgggccg gatcaagaac aatcaggagg 7801 ggaagaagct gaacctggtc attaagaacg aggaatactt cgagtttgtc cagaatagaa 7861 ataacaaaag gccggcggcc acgaaaaagg ccggccaggc aaaaaagaaa aagggatcct 7921 acccatacga tgttccagat tacgcttatc cctacgacgt gcctgattat gcatacccat 7981 atgatgtccc cgactatgcc ccaaagaaga agcggaaggt ccagtgtact aattatgctc 8041 tcttgaaatt ggctggagat gttgagagca acccaggtcc cgaattcatg gtgagcaagg 8101 gcgaggagct gttcaccggg gtggtgccca tcctggtcga gctggacggc gacgtaaacg 8161 gccacaagtt cagcgtgtcc ggcgagggcg agggcgatgc cacctacggc aagctgaccc 8221 tgaagttcat ctgcaccacc ggcaagctgc ccgtgccctg gcccaccctc gtgaccaccc 8281 tgacctacgg cgtgcagtgc ttcagccgct accccgacca catgaagcag cacgacttct 8341 tcaagtccgc catgcccgaa ggctacgtcc aggagcgcac catcttcttc aaggacgacg 8401 gcaactacaa gacccgcgcc gaggtgaagt tcgagggcga caccctggtg aaccgcatcg 8461 agctgaaggg catcgacttc aaggaggacg gcaacatcct ggggcacaag ctggagtaca 8521 actacaacag ccacaacgtc tatatcatgg ccgacaagca gaagaacggc atcaaggtga 8581 acttcaagat ccgccacaac atcgaggacg gcagcgtgca gctcgccgac cactaccagc 8641 agaacacccc catcggcgac ggccccgtgc tgctgcccga caaccactac ctgagcaccc 8701 agtccgccct gagcaaagac cccaacgaga agcgcgatca catggtcctg ctggagttcg 8761 tgaccgccgc cgggatcact ctcggcatgg acgagctgta caagtaagtc gacacgcgtt 8821 ccggaaatca acctctggat tacaaaattt gtgaaagatt gactggtatt cttaactatg 8881 ttgctccttt tacgctatgt ggatacgctg ctttaatgcc tttgtatcat gctattgctt 8941 cccgtatggc tttcattttc tcctccttgt ataaatcctg gttgctgtct ctttatgagg 9001 agttgtggcc cgttgtcagg caacgtggcg tggtgtgcac tgtgtttgct gacgcaaccc 9061 ccactggttg gggcattgcc accacctgtc agctcctttc cgggactttc gctttccccc 9121 tccctattgc cacggcggaa ctcatcgccg cctgccttgc ccgctgctgg acaggggctc 9181 ggctgttggg cactgacaat tccgtggtgt tgtcggggaa gctgacgtcc tttccatggc 9241 tgctcgcctg tgttgccacc tggattctgc gcgggacgtc cttctgctac gtcccttcgg 9301 ccctcaatcc agcggacctt ccttcccgcg gcctgctgcc ggctctgcgg cctcttccgc 9361 gtctcgcctt cgccctcaga cgagtcggat ctccctttgg gccgcctccc cgcctgtccg 9421 gatggaaggg ctaattcact cccaacgaat acaagatctg ctttttgctt gtactgggtc 9481 tctctggtta gaccagatct gagcctggga gctctctggc taactaggga acccactgct 9541 taagcctcaa taaagcttgc cttgagtgct tcaagtagtg tgtgcccgtc tgttgtgtga 9601 ctctggtaac tagagatccc tcagaccctt ttagtcagtg tggaaaatct ctagcagtag 9661 tagttcatgt catcttatta ttcagtattt ataacttgca aagaaatgaa tatcagagag 9721 tgagaggaac ttgtttattg cagcttataa tggttacaaa taaagcaata gcatcacaaa 9781 tttcacaaat aaagcatttt tttcactgca ttctagttgt ggtttgtcca aactcatcaa 9841 tgtatcttat catgtctggc atctatgtcg ggtgcggaga aagaggtaat gaaatggcat 9901 tatgggtatt atgggtctgc attaatgaat cggccaacga tcccggtgtg aaataccgca 9961 cagatgcgta aggagaaaat accgcatcag gcgctcttcc gcttcctcgc tcactgactc 10021 gctgcgctcg gtcgttcggc tgcggcgagc ggtatcagct cactcaaagg cggtaatacg 10081 gttatccaca gaatcagggg ataacgcagg aaagaacatg tgagcaaaag gccagcaaaa 10141 ggccaggaac cgtaaaaagg ccgcgttgct ggcgtttttc cataggctcc gcccccctga 10201 cgagcatcac aaaaatcgac gctcaagtca gaggtggcga aacccgacag gactataaag 10261 ataccaggcg tttccccctg gaagctccct cgtgcgctct cctgttccga ccctgccgct 10321 taccggatac ctgtccgcct ttctcccttc gggaagcgtg gcgctttctc atagctcacg 10381 ctgtaggtat ctcagttcgg tgtaggtcgt tcgctccaag ctgggctgtg tgcacgaacc 10441 ccccgttcag cccgaccgct gcgccttatc cggtaactat cgtcttgagt ccaacccggt 10501 aagacacgac ttatcgccac tggcagcagc cactggtaac aggattagca gagcgaggta 10561 tgtaggcggt gctacagagt tcttgaagtg gtggcctaac tacggctaca ctagaaggac 10621 agtatttggt atctgcgctc tgctgaagcc agttaccttc ggaaaaagag ttggtagctc 10681 ttgatccggc aaacaaacca ccgctggtag cggtggtttt tttgtttgca agcagcagat 10741 tacgcgcaga aaaaaaggat ctcaagaaga tcctttgatc ttttctacgg ggtctgacgc 10801 tcagtggaac gaaaactcac gttaagggat tttggtcatg agattatcaa aaaggatctt 10861 cacctagatc cttttaaatt aaaaatgaag ttttaaatca atctaaagta tatatgagta 10921 aacttggtct gacagttacc aatgcttaat cagtgaggca cctatctcag cgatctgtct 10981 atttcgttca tccatagttg cctgactccc cgtcgtgtag ataactacga tacgggaggg 11041 cttaccatct ggccccagtg ctgcaatgat accgcgagac ccacgctcac cggctccaga 11101 tttatcagca ataaaccagc cagccggaag ggccgagcgc agaagtggtc ctgcaacttt 11161 atccgcctcc atccagtcta ttaattgttg ccgggaagct agagtaagta gttcgccagt 11221 taatagtttg cgcaacgttg ttgaaaaagg atcttcacct agatcctttt cacgtagaaa 11281 gccagtccgc agaaacggtg ctgaccccgg atgaatgtca gctactgggc tatctggaca 11341 agggaaaacg caagcgcaaa gagaaagcag gtagcttgca gtgggcttac atggcgatag 11401 ctagactggg cggttttatg gacagcaagc gaaccggaat tgccagctgg ggcgccctct 11461 ggtaaggttg ggaagccctg caaagtaaac tggatggctt tctcgccgcc aaggatctga 11521 tggcgcaggg gatcaagctc tgatcaagag acaggatgag gatcgtttcg catgattgaa 11581 caagatggat tgcacgcagg ttctccggcc gcttgggtgg agaggctatt cggctatgac 11641 tgggcacaac agacaatcgg ctgctctgat gccgccgtgt tccggctgtc agcgcagggg 11701 cgcccggttc tttttgtcaa gaccgacctg tccggtgccc tgaatgaact gcaagacgag 11761 gcagcgcggc tatcgtggct ggccacgacg ggcgttcctt gcgcagctgt gctcgacgtt 11821 gtcactgaag cgggaaggga ctggctgcta ttgggcgaag tgccggggca ggatctcctg 11881 tcatctcacc ttgctcctgc cgagaaagta tccatcatgg ctgatgcaat gcggcggctg 11941 catacgcttg atccggctac ctgcccattc gaccaccaag cgaaacatcg catcgagcga 12001 gcacgtactc ggatggaagc cggtcttgtc gatcaggatg atctggacga agagcatcag 12061 gggctcgcgc cagccgaact gttcgccagg ctcaaggcga gcatgcccga cggcgaggat 12121 ctcgtcgtga cccatggcga tgcctgcttg ccgaatatca tggtggaaaa tggccgcttt 12181 tctggattca tcgactgtgg ccggctgggt gtggcggacc gctatcagga catagcgttg 12241 gctacccgtg atattgctga agagcttggc ggcgaatggg ctgaccgctt cctcgtgctt 12301 tacggtatcg ccgctcccga ttcgcagcgc atcgccttct atcgccttct tgacgagttc 12361 ttctgaattt tgttaaaatt tttgttaaat cagctcattt tttaaccaat aggccgaaat 12421 cggcaacatc ccttataaat caaaagaata gaccgcgata gggttgagtg ttgttccagt 12481 ttggaacaag agtccactat taaagaacgt ggactccaac gtcaaagggc gaaaaaccgt 12541 ctatcagggc gatggcccac tacgtgaacc atcacccaaa tcaagttttt tgcggtcgag 12601 gtgccgtaaa gctctaaatc ggaaccctaa agggagcccc cgatttagag cttgacgggg 12661 aaagccggcg aacgtggcga gaaaggaagg gaagaaagcg aaaggagcgg gcgctagggc 12721 gctggcaagt gtagcggtca cgctgcgcgt aaccaccaca cccgcgcgct taatgcgccg 12781 ctacagggcg cgtccattcg ccattcagga tcgaattaat tcttaattaa catcatcaat 12841 aatatacctt
LOCUS dna 12850 bp FEATURES Location/Qualifiers Other Gene 162..310 /gene="Encap other" Promoter 365..393 /gene="amp prom" misc_binding 457..462 /dbxref="REBASE:HpaI" Other Gene 715..895 /gene="HIV-1_5_LTR other" Other Gene 1006..1050 /gene="HIV-1_psi_pack other" misc_binding 1092..1097 /dbxref="REBASE:NruI" Regulatory_Seq 1557..1790 /gene="RRE reg" ORF 1600..2301 /sequence="ORF_1 rf(1)" ORF 2749..3687 /sequence="ORF_4 rf(5)" misc_binding 2753..2758 /dbxref="REBASE:XbaI" Promoter 2770..3947 /gene="EF1a prom" misc_binding 3382..3387 /dbxref="REBASE:ApaI" ORF 3966..8807 /sequence="ORF_3 rf(3)" misc_binding 4347..4352 /dbxref="REBASE:ClaI" misc_binding 7914..7919 /dbxref="REBASE:BamHI" Tag 7920..7946 /gene="HA tag" misc_binding 8082..8087 /dbxref="REBASE:EcoRI" Reporter 8088..8804 /gene="EGFP reporter" Other Gene 9423..9475 /gene="delta_U3 other" Other Gene 9476..9656 /gene="HIV-1_5_LTR other" Rep_Origin 10162..10781 /gene="pBR322 origin" Promoter 11434..11483 /gene="NEOKAN prom" ORF 11572..12366 /sequence="ORF_2 rf(1)" Marker 11575..12363 /gene="NTP_II marker" Rep_Origin 12471..12776 /gene="f1 origin" BASE COUNT 3526 a 2989 c 3386 g 2949 t 0 others ORIGIN 1 ttttggattg aagccaatat gataatgagg gggtggagtt tgtgacgtgg cgcggggcgt 61 gggaacgggg cgggtgacgt agtagtgtgg cggaagtgtg atgttgcaag tgtggcggaa 121 cacatgtaag cgacggatgt ggcaaaagtg acgtttttgg tgtgcgccgg tgtacacagg 181 aagtgacaat tttcgcgcgg ttttaggcgg atgttgtagt aaatttgggc gtaaccgagt 241 aagatttggc cattttcgcg ggaaaactga ataagaggaa gtgaaatctg aataattttg 301 tgttactcat agcgcgtaat acggcagacc tcagcgctag attattgaag catttatcag 361 ggttattgtc tcatgagcgg atacatattt gaatgtattt agaaaaataa acaaataggg 421 gttccgcgca catttccccg aaaagtgcca cctgacgtta actataacgg tcctaaggta 481 gcgaaaatgt agtcttatgc aatactcttg tagtcttgca acatggtaac gatgagttag 541 caacatgcct tacaaggaga gaaaaagcac cgtgcatgcc gattggtgga agtaaggtgg 601 tacgatcgtg ccttattagg aaggcaacag acgggtctga catggattgg acgaaccact 661 gaattgccgc attgcagaga tattgtattt aagtgcctag ctcgatacat aaacgggtct 721 ctctggttag accagatctg agcctgggag ctctctggct aactagggaa cccactgctt 781 aagcctcaat aaagcttgcc ttgagtgctt caagtagtgt gtgcccgtct gttgtgtgac 841 tctggtaact agagatccct cagacccttt tagtcagtgt ggaaaatctc tagcagtggc 901 gcccgaacag ggacttgaaa gcgaaaggga aaccagagga gctctctcga cgcaggactc 961 ggcttgctga agcgcgcacg gcaagaggcg aggggcggcg actggtgagt acgccaaaaa 1021 ttttgactag cggaggctag aaggagagag atgggtgcga gagcgtcagt attaagcggg 1081 ggagaattag atcgcgatgg gaaaaaattc ggttaaggcc agggggaaag aaaaaatata 1141 aattaaaaca tatagtatgg gcaagcaggg agctagaacg attcgcagtt aatcctggcc 1201 tgttagaaac atcagaaggc tgtagacaaa tactgggaca gctacaacca tcccttcaga 1261 caggatcaga agaacttaga tcattatata atacagtagc aaccctctat tgtgtgcatc 1321 aaaggataga gataaaagac accaaggaag ctttagacaa gatagaggaa gagcaaaaca 1381 aaagtaagac caccgcacag caagcccgct gatcttcaga cctggaggag gagatatgag 1441 ggacattgga gaagtgaatt atataaatat aaagtagtaa aaattgaacc attaggagta 1501 gcacccacca aggcaaagag aagagtggtg cagagagaaa aaagagcagt gggaatagga 1561 gctttgttcc ttgggttctt gggagcagca ggaagcacta tgggcgcagc gtcaatgacg 1621 ctgacggtac aggccagaca attattgtct ggtatagtgc agcagcagaa caatttgctg 1681 agggctattg aggcgcaaca gcatctgttg caactcacag tctggggcat caagcagctc 1741 caggcaagaa tcctggctgt ggaaagatac ctaaaggatc aacagctcct ggggatttgg 1801 ggttgctctg gaaaactcat ttgcaccact gctgtgcctt ggaatgctag ttggagtaat 1861 aaatctctgg aacagatttg gaatcacacg acctggatgg agtgggacag agaaattaac 1921 aattacacaa gcttaataca ctccttaatt gaagaatcgc aaaaccagca agaaaagaat 1981 gaacaagaat tattggaatt agataaatgg gcaagtttgt ggaattggtt taacataaca 2041 aattggctgt ggtatataaa attattcata atgatagtag gaggcttggt aggtttaaga 2101 atagtttttg ctgtactttc tatagtgaat agagttaggc agggatattc accattatcg 2161 tttcagaccc acctcccaac cccgagggga cccgacaggc ccgaaggaat agaagaagaa 2221 ggtggagaga gagacagaga cagatccatt cgattagtga acggatctcg acggtatcga 2281 aagcttggga ttcgaattta aaagaaaagg ggggattggg gggtacagtg caggggaaag 2341 aatagtagac ataatagcaa cagacataca aactaaagaa ctacaaaaac aaattacaaa 2401 aattcaaaat tttcgggttt ttcgaaccta gggagggcct atttcccatg attccttcat 2461 atttgcatat acgatacaag gctgttagag agataattgg aattaatttg actgtaaaca 2521 caaagatatt agtacaaaat acgtgacgta gaaagtaata atttcttggg tagtttgcag 2581 ttttaaaatt atgttttaaa atggactatc atatgcttac cgtaacttga aagtatttcg 2641 atttcttggc tttatatatc ttgtggaaag gacgaaacac cgtctaagaa ctttaaataa 2701 tttctactgt tgtagatttg tcttcctcga ggaagacaat ttttttagtc agtctagaga 2761 gtgggaattg gctccggtgc ccgtcagtgg gcagagcgca catcgcccac agtccccgag 2821 aagttggggg gaggggtcgg caattgaacc ggtgcctaga gaaggtggcg cggggtaaac 2881 tgggaaagtg atgtcgtgta ctggctccgc ctttttcccg agggtggggg agaaccgtat 2941 ataagtgcag tagtcgccgt gaacgttctt tttcgcaacg ggtttgccgc cagaacacag 3001 gtaagtgccg tgtgtggttc ccgcgggcct ggcctcttta cgggttatgg cccttgcgtg 3061 ccttgaatta cttccactgg ctgcagtacg tgattcttga tcccgagctt cgggttggaa 3121 gtgggtggga gagttcgagg ccttgcgctt aaggagcccc ttcgcctcgt gcttgagttg 3181 aggcctggcc tgggcgctgg ggccgccgcg tgcgaatctg gtggcacctt cgcgcctgtc 3241 tcgctgcttt cgataagtct ctagccattt aaaatttttg atgacctgct gcgacgcttt 3301 ttttctggca agatagtctt gtaaatgcgg gccaagatct gcacactggt atttcggttt 3361 ttggggccgc gggcggcgac ggggcccgtg cgtcccagcg cacatgttcg gcgaggcggg 3421 gcctgcgagc gcggccaccg agaatcggac gggggtagtc tcaagctggc cggcctgctc 3481 tggtgcctgg cctcgcgccg ccgtgtatcg ccccgccctg ggcggcaagg ctggcccggt 3541 cggcaccagt tgcgtgagcg gaaagatggc cgcttcccgg ccctgctgca gggagctcaa 3601 aatggaggac gcggcgctcg ggagagcggg cgggtgagtc acccacacaa aggaaaaggg 3661 cctttccgtc ctcagccgtc gcttcatgtg actccacgga gtaccgggcg ccgtccaggc 3721 acctcgatta gttctcgagc ttttggagta cgtcgtcttt aggttggggg gaggggtttt 3781 atgcgatgga gtttccccac actgagtggg tggagactga agttaggcca gcttggcact 3841 tgatgtaatt ctccttggaa tttgcccttt ttgagtttgg atcttggttc attctcaagc 3901 ctcagacagt ggttcaaagt ttttttcttc catttcaggt gtcgtgagga atttcgactg 3961 ctagcatgag catctaccag gagttcgtca acaagtattc actgagtaag acactgcggt 4021 tcgagctgat cccacagggc aagacactgg agaacatcaa ggcccgaggc ctgattctgg 4081 acgatgagaa gcgggcaaaa gactataaga aagccaagca gatcattgat aaataccacc 4141 agttctttat cgaggaaatt ctgagctccg tgtgcatcag tgaggatctg ctgcagaatt 4201 actcagacgt gtacttcaag ctgaagaaga gcgacgatga caacctgcag aaggacttca 4261 agtccgccaa ggacaccatc aagaaacaga ttagcgagta catcaaggac tccgaaaagt 4321 ttaaaaatct gttcaaccag aatctgatcg atgctaagaa aggccaggag tccgacctga 4381 tcctgtggct gaaacagtct aaggacaatg ggattgaact gttcaaggct aactccgata 4441 tcactgatat tgacgaggca ctggaaatca tcaagagctt caagggatgg accacatact 4501 ttaaaggctt ccacgagaac cgcaagaacg tgtactccag caacgacatt cctacctcca 4561 tcatctaccg aatcgtcgat gacaatctgc caaagttcct ggagaacaag gccaaatatg 4621 aatctctgaa ggacaaagct cccgaggcaa ttaattacga acagatcaag aaagatctgg 4681 ctgaggaact gacattcgat atcgactata agactagcga ggtgaaccag agggtctttt 4741 ccctggacga ggtgtttgaa atcgccaatt tcaacaatta cctgaaccag tccggcatta 4801 ctaaattcaa taccatcatt ggcgggaagt ttgtgaacgg ggagaatacc aagcgcaagg 4861 gaattaacga atacatcaat ctgtatagcc agcagatcaa cgacaaaact ctgaagaaat 4921 acaagatgtc tgtgctgttc aaacagatcc tgagtgatac cgagtccaag tcttttgtca 4981 ttgataaact ggaagatgac tcagacgtgg tcactaccat gcagagcttt tatgagcaga 5041 tcgccgcttt caagacagtg gaggaaaaat ctattaagga aactctgagt ctgctgttcg 5101 atgacctgaa agcccagaag ctggacctga gtaagatcta cttcaaaaac gataagagtc 5161 tgacagacct gtcacagcag gtgtttgatg actattccgt gattgggacc gccgtcctgg 5221 agtacattac acagcagatc gctccaaaga acctggataa tccctctaag aaagagcagg 5281 aactgatcgc taagaaaacc gagaaggcaa aatatctgag tctggaaaca attaagctgg 5341 cactggagga gttcaacaag cacagggata ttgacaaaca gtgccgcttt gaggaaatcc 5401 tggccaactt cgcagccatc cccatgattt ttgatgagat cgcccagaac aaagacaatc 5461 tggctcagat cagtattaag taccagaacc agggcaagaa agacctgctg caggcttcag 5521 cagaagatga cgtgaaagcc atcaaggatc tgctggacca gaccaacaat ctgctgcaca 5581 agctgaaaat cttccatatt agtcagtcag aggataaggc taatatcctg gataaagacg 5641 aacacttcta cctggtgttc gaggaatgtt acttcgagct ggcaaacatt gtccccctgt 5701 ataacaagat taggaactac atcacacaga agccttactc tgacgagaag tttaaactga 5761 acttcgaaaa tagtaccctg gccaacgggt gggataagaa caaggagcct gacaacacag 5821 ctatcctgtt catcaaggat gacaagtact atctgggagt gatgaataag aaaaacaata 5881 agatcttcga tgacaaagcc attaaggaga acaaagggga aggatacaag aaaatcgtgt 5941 ataagctgct gcccggcgca aataagatgc tgcctaaggt gttcttcagc gccaagagta 6001 tcaaattcta caacccatcc gaggacatcc tgcggattag aaatcactca acacatacta 6061 agaacgggag cccccagaag ggatatgaga aatttgagtt caacatcgag gattgcagga 6121 agtttattga cttctacaag cagagcatct ccaaacaccc tgaatggaag gattttggct 6181 tccggttttc cgacacacag agatataact ctatcgacga gttctaccgc gaggtggaaa 6241 atcaggggta taagctgact tttgagaaca tttctgaaag ttacatcgac agcgtggtca 6301 atcagggaaa gctgtacctg ttccagatct ataacaaaga tttttcagca tacagcaagg 6361 gcagaccaaa cctgcataca ctgtactgga aggccctgtt cgatgagagg aatctgcagg 6421 acgtggtcta taaactgaac ggagaggccg aactgtttta ccggaagcag tctattccta 6481 agaaaatcac tcacccagct aaggaggcca tcgctaacaa gaacaaggac aatcctaaga 6541 aagagagcgt gttcgaatac gatctgatta aggacaagcg gttcaccgaa gataagttct 6601 ttttccattg tccaatcacc attaacttca agtcaagcgg cgctaacaag ttcaacgacg 6661 agatcaatct gctgctgaag gaaaaagcaa acgatgtgca catcctgagc attgaccgag 6721 gagagcggca tctggcctac tataccctgg tggatggcaa agggaatatc attaagcagg 6781 atacattcaa catcattggc aatgaccgga tgaaaaccaa ctaccacgat aaactggctg 6841 caatcgagaa ggatagagac tcagctagga aggactggaa gaaaatcaac aacattaagg 6901 agatgaagga aggctatctg agccaggtgg tccatgagat tgcaaagctg gtcatcgaat 6961 acaatgccat tgtggtgttc gaggatctga acttcggctt taagaggggg cgctttaagg 7021 tggaaaaaca ggtctatcag aagctggaga aaatgctgat cgaaaagctg aattacctgg 7081 tgtttaaaga taacgagttc gacaagaccg gaggcgtcct gagagcctac cagctgacag 7141 ctccctttga aactttcaag aaaatgggaa aacagacagg catcatctac tatgtgccag 7201 ccggattcac ttccaagatc tgccccgtga ccggctttgt caaccagctg taccctaaat 7261 atgagtcagt gagcaagtcc caggaatttt tcagcaagtt cgataagatc tgttataatc 7321 tggacaaggg gtacttcgag ttttccttcg attacaagaa cttcggcgac aaggccgcta 7381 aggggaaatg gaccattgcc tccttcggat ctcgcctgat caactttcga aattccgata 7441 aaaaccacaa ttgggacact agggaggtgt acccaaccaa ggagctggaa aagctgctga 7501 aagactactc tatcgagtat ggacatggcg aatgcatcaa ggcagccatc tgtggcgaga 7561 gtgataagaa atttttcgcc aagctgacct cagtgctgaa tacaatcctg cagatgcgga 7621 actcaaagac cgggacagaa ctggactatc tgattagccc cgtggctgat gtcaacggaa 7681 acttcttcga cagcagacag gcacccaaaa atatgcctca ggatgcagac gccaacgggg 7741 cctaccacat cgggctgaag ggactgatgc tgctgggccg gatcaagaac aatcaggagg 7801 ggaagaagct gaacctggtc attaagaacg aggaatactt cgagtttgtc cagaatagaa 7861 ataacaaaag gccggcggcc acgaaaaagg ccggccaggc aaaaaagaaa aagggatcct 7921 acccatacga tgttccagat tacgcttatc cctacgacgt gcctgattat gcatacccat 7981 atgatgtccc cgactatgcc ccaaagaaga agcggaaggt ccagtgtact aattatgctc 8041 tcttgaaatt ggctggagat gttgagagca acccaggtcc cgaattcatg gtgagcaagg 8101 gcgaggagct gttcaccggg gtggtgccca tcctggtcga gctggacggc gacgtaaacg 8161 gccacaagtt cagcgtgtcc ggcgagggcg agggcgatgc cacctacggc aagctgaccc 8221 tgaagttcat ctgcaccacc ggcaagctgc ccgtgccctg gcccaccctc gtgaccaccc 8281 tgacctacgg cgtgcagtgc ttcagccgct accccgacca catgaagcag cacgacttct 8341 tcaagtccgc catgcccgaa ggctacgtcc aggagcgcac catcttcttc aaggacgacg 8401 gcaactacaa gacccgcgcc gaggtgaagt tcgagggcga caccctggtg aaccgcatcg 8461 agctgaaggg catcgacttc aaggaggacg gcaacatcct ggggcacaag ctggagtaca 8521 actacaacag ccacaacgtc tatatcatgg ccgacaagca gaagaacggc atcaaggtga 8581 acttcaagat ccgccacaac atcgaggacg gcagcgtgca gctcgccgac cactaccagc 8641 agaacacccc catcggcgac ggccccgtgc tgctgcccga caaccactac ctgagcaccc 8701 agtccgccct gagcaaagac cccaacgaga agcgcgatca catggtcctg ctggagttcg 8761 tgaccgccgc cgggatcact ctcggcatgg acgagctgta caagtaagtc gacacgcgtt 8821 ccggaaatca acctctggat tacaaaattt gtgaaagatt gactggtatt cttaactatg 8881 ttgctccttt tacgctatgt ggatacgctg ctttaatgcc tttgtatcat gctattgctt 8941 cccgtatggc tttcattttc tcctccttgt ataaatcctg gttgctgtct ctttatgagg 9001 agttgtggcc cgttgtcagg caacgtggcg tggtgtgcac tgtgtttgct gacgcaaccc 9061 ccactggttg gggcattgcc accacctgtc agctcctttc cgggactttc gctttccccc 9121 tccctattgc cacggcggaa ctcatcgccg cctgccttgc ccgctgctgg acaggggctc 9181 ggctgttggg cactgacaat tccgtggtgt tgtcggggaa gctgacgtcc tttccatggc 9241 tgctcgcctg tgttgccacc tggattctgc gcgggacgtc cttctgctac gtcccttcgg 9301 ccctcaatcc agcggacctt ccttcccgcg gcctgctgcc ggctctgcgg cctcttccgc 9361 gtctcgcctt cgccctcaga cgagtcggat ctccctttgg gccgcctccc cgcctgtccg 9421 gatggaaggg ctaattcact cccaacgaat acaagatctg ctttttgctt gtactgggtc 9481 tctctggtta gaccagatct gagcctggga gctctctggc taactaggga acccactgct 9541 taagcctcaa taaagcttgc cttgagtgct tcaagtagtg tgtgcccgtc tgttgtgtga 9601 ctctggtaac tagagatccc tcagaccctt ttagtcagtg tggaaaatct ctagcagtag 9661 tagttcatgt catcttatta ttcagtattt ataacttgca aagaaatgaa tatcagagag 9721 tgagaggaac ttgtttattg cagcttataa tggttacaaa taaagcaata gcatcacaaa 9781 tttcacaaat aaagcatttt tttcactgca ttctagttgt ggtttgtcca aactcatcaa 9841 tgtatcttat catgtctggc atctatgtcg ggtgcggaga aagaggtaat gaaatggcat 9901 tatgggtatt atgggtctgc attaatgaat cggccaacga tcccggtgtg aaataccgca 9961 cagatgcgta aggagaaaat accgcatcag gcgctcttcc gcttcctcgc tcactgactc 10021 gctgcgctcg gtcgttcggc tgcggcgagc ggtatcagct cactcaaagg cggtaatacg 10081 gttatccaca gaatcagggg ataacgcagg aaagaacatg tgagcaaaag gccagcaaaa 10141 ggccaggaac cgtaaaaagg ccgcgttgct ggcgtttttc cataggctcc gcccccctga 10201 cgagcatcac aaaaatcgac gctcaagtca gaggtggcga aacccgacag gactataaag 10261 ataccaggcg tttccccctg gaagctccct cgtgcgctct cctgttccga ccctgccgct 10321 taccggatac ctgtccgcct ttctcccttc gggaagcgtg gcgctttctc atagctcacg 10381 ctgtaggtat ctcagttcgg tgtaggtcgt tcgctccaag ctgggctgtg tgcacgaacc 10441 ccccgttcag cccgaccgct gcgccttatc cggtaactat cgtcttgagt ccaacccggt 10501 aagacacgac ttatcgccac tggcagcagc cactggtaac aggattagca gagcgaggta 10561 tgtaggcggt gctacagagt tcttgaagtg gtggcctaac tacggctaca ctagaaggac 10621 agtatttggt atctgcgctc tgctgaagcc agttaccttc ggaaaaagag ttggtagctc 10681 ttgatccggc aaacaaacca ccgctggtag cggtggtttt tttgtttgca agcagcagat 10741 tacgcgcaga aaaaaaggat ctcaagaaga tcctttgatc ttttctacgg ggtctgacgc 10801 tcagtggaac gaaaactcac gttaagggat tttggtcatg agattatcaa aaaggatctt 10861 cacctagatc cttttaaatt aaaaatgaag ttttaaatca atctaaagta tatatgagta 10921 aacttggtct gacagttacc aatgcttaat cagtgaggca cctatctcag cgatctgtct 10981 atttcgttca tccatagttg cctgactccc cgtcgtgtag ataactacga tacgggaggg 11041 cttaccatct ggccccagtg ctgcaatgat accgcgagac ccacgctcac cggctccaga 11101 tttatcagca ataaaccagc cagccggaag ggccgagcgc agaagtggtc ctgcaacttt 11161 atccgcctcc atccagtcta ttaattgttg ccgggaagct agagtaagta gttcgccagt 11221 taatagtttg cgcaacgttg ttgaaaaagg atcttcacct agatcctttt cacgtagaaa 11281 gccagtccgc agaaacggtg ctgaccccgg atgaatgtca gctactgggc tatctggaca 11341 agggaaaacg caagcgcaaa gagaaagcag gtagcttgca gtgggcttac atggcgatag 11401 ctagactggg cggttttatg gacagcaagc gaaccggaat tgccagctgg ggcgccctct 11461 ggtaaggttg ggaagccctg caaagtaaac tggatggctt tctcgccgcc aaggatctga 11521 tggcgcaggg gatcaagctc tgatcaagag acaggatgag gatcgtttcg catgattgaa 11581 caagatggat tgcacgcagg ttctccggcc gcttgggtgg agaggctatt cggctatgac 11641 tgggcacaac agacaatcgg ctgctctgat gccgccgtgt tccggctgtc agcgcagggg 11701 cgcccggttc tttttgtcaa gaccgacctg tccggtgccc tgaatgaact gcaagacgag 11761 gcagcgcggc tatcgtggct ggccacgacg ggcgttcctt gcgcagctgt gctcgacgtt 11821 gtcactgaag cgggaaggga ctggctgcta ttgggcgaag tgccggggca ggatctcctg 11881 tcatctcacc ttgctcctgc cgagaaagta tccatcatgg ctgatgcaat gcggcggctg 11941 catacgcttg atccggctac ctgcccattc gaccaccaag cgaaacatcg catcgagcga 12001 gcacgtactc ggatggaagc cggtcttgtc gatcaggatg atctggacga agagcatcag 12061 gggctcgcgc cagccgaact gttcgccagg ctcaaggcga gcatgcccga cggcgaggat 12121 ctcgtcgtga cccatggcga tgcctgcttg ccgaatatca tggtggaaaa tggccgcttt 12181 tctggattca tcgactgtgg ccggctgggt gtggcggacc gctatcagga catagcgttg 12241 gctacccgtg atattgctga agagcttggc ggcgaatggg ctgaccgctt cctcgtgctt 12301 tacggtatcg ccgctcccga ttcgcagcgc atcgccttct atcgccttct tgacgagttc 12361 ttctgaattt tgttaaaatt tttgttaaat cagctcattt tttaaccaat aggccgaaat 12421 cggcaacatc ccttataaat caaaagaata gaccgcgata gggttgagtg ttgttccagt 12481 ttggaacaag agtccactat taaagaacgt ggactccaac gtcaaagggc gaaaaaccgt 12541 ctatcagggc gatggcccac tacgtgaacc atcacccaaa tcaagttttt tgcggtcgag 12601 gtgccgtaaa gctctaaatc ggaaccctaa agggagcccc cgatttagag cttgacgggg 12661 aaagccggcg aacgtggcga gaaaggaagg gaagaaagcg aaaggagcgg gcgctagggc 12721 gctggcaagt gtagcggtca cgctgcgcgt aaccaccaca cccgcgcgct taatgcgccg 12781 ctacagggcg cgtccattcg ccattcagga tcgaattaat tcttaattaa catcatcaat 12841 aatatacctt